Dominik Lukeš
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AI for research and academic work

Using AI tools for reading, literature search, analysis and writing in academic practice.

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From Oracle to Tool User: Amplifying research processes with AI agents

Talks Faculty of Music, University of Oxford (Methods and Methodologies for Music Research series) · 24 November 2026 · Talk

Researchers get more from AI when they move from asking a chatbot for answers to using desktop agents that work with their files and tools. The lecture shows how agents can work with archives, organise data, write and adapt analysis…

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Academic Reading Framework

Guides Framework

A web application presenting a framework for improving academic reading productivity. Readers choose a framework point on the landing page to open its full description, and an interactive diagram shows the cognitive processes involved…

academic-paper-review

Agent skills Agent skill

Structured review of academic papers, with templates and scoring rubrics you can adapt.

academic-pdf-to-mkd

Agent skills Agent skill

Converts academic PDFs, including scans, into Markdown with figures, tables and page images as separate files.

AI for Research(ers): Principles, Context, and Tools

Teaching Workshop

A hands-on workshop designed to move researchers from basic principles to practical application of Large Language Models. This session covers the cognitive baseline of LLMs, the nuances of context management, and the creation of custom…

archive-scout

Agent skills Agent skill

Searches, quotes and counts words in your own writing and reading highlights with the local scout tool, and writes cited reports with a JSON evidence file.

claim-fact-checker

Agent skills Agent skill

Checks every factual claim in a report against its sources, one isolated checker per claim, and writes findings and a fix plan.

Highlight Scout

Apps Desktop apps

Fast, local search across all your reading highlights: Readwise, Zotero, Kindle and more.

paper-reviewer-skill

Agent skills Agent skill

Imports a paper from Zotero, extracts its text, figures and tables, and writes structured reviews.

Practical AI

Guides Notion guide

A set of pragmatic guides to using AI day to day in research, writing and teaching.

research-translation

Agent skills Agent skill

Runs auditable translation and back-translation of participant-facing research documents such as consent forms.

speech-to-text-skill

Agent skills Agent skill

Transcribes audio locally on Apple Silicon (Qwen3-ASR, Parakeet, Whisper) into time-coded transcripts, with optional speaker labels.

video-analysis

Agent skills Agent skill

Describes, summarises or answers questions about a video on your own machine with a local model.

Zotero Agent Bridge

Apps Plugins and research tools

VS Code extension that pulls PDFs and notes from Zotero into a local folder with metadata for agents.

zotero-wrangler

Agent skills Agent skill

Manages Zotero imports, linked notes, evidence-backed tags and scoped native full-text discovery.

ZoteroLM

Apps Plugins and research tools

LLM-powered summarization and Q&A for your Zotero library.